miRBase entry: lan-mir-193-1

Stem-loop lan-mir-193-1


Accession
MI0042216
Description
Lingula anatina lan-mir-193-1 precursor miRNA


Sequence


aacaguacgggcuacacguccucucucaucAGGGAGUUUGCUCGCCAUGCUUAuggcucugaaccuauaAACUGGCCUGCAAAAUCCCUUCugacguggggacauugagcaaacccgugau
.....((((((((....((((((.((((..(((((.(((((..((((.(.((((((........)))))).)))))..))))).)))))..))).).))))))....)))....)))))..

Structure
aacag     ----   acac      u -   uc     G     UC    U C      cuc 
     uacgg    gcu    guccuc c uca  AGGGA UUUGC  GCCA G UUAugg   u
     |||||    |||    |||||| | |||  ||||| |||||  |||| | ||||||    
     gugcc    cga    cagggg g agu  UCCCU AAACG  CGGU C Aauauc   g
---ua     caaa   guua      u c   CU     A     UC    - A      caa 


Annotation confidence Not enough data
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Genome context
LFEI01000500: 127748-127808 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lan-mir-193-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lan-miR-193-5p

Accession MIMAT0063780
Description Lingula anatina lan-miR-193-5p mature miRNA
Sequence 31 - AGGGAGUUUGCUCGCCAUGCUUA - 53
Evidence not_experimental

Mature lan-miR-193-3p

Accession MIMAT0063779
Description Lingula anatina lan-miR-193-3p mature miRNA
Sequence 70 - AACUGGCCUGCAAAAUCCCUUC - 91
Evidence not_experimental

References