miRBase entry: lan-mir-92f

Stem-loop lan-mir-92f


Accession
MI0042227
Description
Lingula anatina lan-mir-92f precursor miRNA


Sequence


cauuugccacacuguccuguauacuugagcAGGUCUUGAUGCGUGCAAUUUUguuuuuuuuuaaagcaAAUUGCACGCGUCCCGGCCUACuugaauaaccauuaacagcagagcuuugac
.....((....((((..((..((.(((((.(((((..((((((((((((((.(((((.....)))))))))))))))))))..))))).))))).))..))...))))....))......

Structure
-cauuu  caca    -cc  ua  c     c     UU              U     u 
      gc    cugu   ug  ua uugag AGGUC  GAUGCGUGCAAUUU guuuu u
      ||    ||||   ||  || ||||| |||||  |||||||||||||| ||||| u
      cg    gaca   ac  au aguuC UCCGG  CUGCGCACGUUAAa cgaaa u
caguuu  agac    auu  ca  a     A     CC              -     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
LFEI01000686: 142810-142869 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lan-mir-92f
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lan-miR-92f-5p

Accession MIMAT0063800
Description Lingula anatina lan-miR-92f-5p mature miRNA
Sequence 31 - AGGUCUUGAUGCGUGCAAUUUU - 52
Evidence not_experimental

Mature lan-miR-92f-3p

Accession MIMAT0063799
Description Lingula anatina lan-miR-92f-3p mature miRNA
Sequence 69 - AAUUGCACGCGUCCCGGCCUAC - 90
Evidence not_experimental

References