miRBase entry: lan-mir-92c-1

Stem-loop lan-mir-92c-1


Accession
MI0042234
Description
Lingula anatina lan-mir-92c-1 precursor miRNA


Sequence


auuuaaguaaaagaguguguuguacgugacAGGCGGAACGAGAGCAACUUUGauaacuuuuguccccaAAUUGCACUCGUCCCGGCCUGCcgcgcucggcauuccgacgucuagcugcac
.....(((...(((((((((((..((((.(((((((.(((((.((((.((((...((....))...)))))))).))))).)).))))).))))..))))))....)).))).)))....

Structure
auuua   aaa   -  ----      ua    a     -  A     A    C    aua  u 
     agu   aga gu    guguug  cgug cAGGC GG ACGAG GCAA UUUG   ac u
     |||   ||| ||    ||||||  |||| ||||| || ||||| |||| ||||   ||  
     ucg   ucu ca    uacggc  gcgc GUCCG CC UGCUC CGUU AAac   ug u
-cacg   --a   g  gccu      uc    C     G  C     A    -    ccc  u 


Annotation confidence Not enough data
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Genome context
LFEI01000276: 121524-121583 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from lan-mir-92c-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lan-miR-92c-1-5p

Accession MIMAT0063811
Description Lingula anatina lan-miR-92c-1-5p mature miRNA
Sequence 31 - AGGCGGAACGAGAGCAACUUUG - 52
Evidence not_experimental

Mature lan-miR-92c-3p

Accession MIMAT0063809
Description Lingula anatina lan-miR-92c-3p mature miRNA
Sequence 69 - AAUUGCACUCGUCCCGGCCUGC - 90
Evidence not_experimental

References