miRBase entry: lan-mir-12-1

Stem-loop lan-mir-12-1


Accession
MI0042253
Description
Lingula anatina lan-mir-12-1 precursor miRNA


Sequence


ccaguauaaaaaguaugagaaugucauccaUGAGUAUUACAUCAGGUACUGAuggugguucucaacucAGUGCCUUGUGUGAUAUUCUUGgguugcugcucauuucaacacuagcugguu
(((((.........(((((...((.(((((.(((((((((((.(((((((((.(.((.....)).)))))))))).))))))))))).))))).))..)))))..........)))))..

Structure
--     -auaaaaagu     aau  c     U           C         u g  g 
  ccagu          augag   gu aucca GAGUAUUACAU AGGUACUGA g ug u
  |||||          |||||   || ||||| ||||||||||| ||||||||| | || u
  ggucg          uacuc   cg uggGU CUUAUAGUGUG UCCGUGAcu c ac c
uu     aucacaacuu     -gu  u     U           U         - a  u 


Annotation confidence Not enough data
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Genome context
LFEI01001594: 16199-16258 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from lan-mir-12-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lan-miR-12-5p

Accession MIMAT0063835
Description Lingula anatina lan-miR-12-5p mature miRNA
Sequence 31 - UGAGUAUUACAUCAGGUACUGA - 52
Evidence not_experimental

Mature lan-miR-12-3p

Accession MIMAT0063836
Description Lingula anatina lan-miR-12-3p mature miRNA
Sequence 69 - AGUGCCUUGUGUGAUAUUCUUG - 90
Evidence not_experimental

References