miRBase entry: lan-mir-10-1

Stem-loop lan-mir-10-1


Accession
MI0042258
Description
Lingula anatina lan-mir-10-1 precursor miRNA


Sequence


aaaaucccagaucccacucggcaccauuucUACCCUGUAGAUCCGAAUUUGUAugauauuugaauaCAAAUUCGGUCUAUAGGAUUUCaugugguguagguaauucagcauuuacuac
....................(((((((......((((((((.((((((((((((.........)))))))))))))))))))).......))))))).(((((........)))))..

Structure
-aaaaucccagaucccacucg       -uucUAC        U            gau 
                     gcaccau       CCUGUAGA CCGAAUUUGUAu   a
                     |||||||       |||||||| ||||||||||||   u
                     uguggug       GGAUAUCU GGCUUAAACaua   u
caucauuuacgacuuaaugga       uaCUUUA        -            agu 


Annotation confidence Not enough data
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Genome context
LFEI01000202: 129197-129254 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lan-mir-10-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lan-miR-10-5p

Accession MIMAT0063843
Description Lingula anatina lan-miR-10-5p mature miRNA
Sequence 31 - UACCCUGUAGAUCCGAAUUUGUA - 53
Evidence not_experimental

Mature lan-miR-10-3p

Accession MIMAT0063844
Description Lingula anatina lan-miR-10-3p mature miRNA
Sequence 67 - CAAAUUCGGUCUAUAGGAUUUC - 88
Evidence not_experimental

References