Stem-loop snu-mir-2001

Accession

MI0042276

Description

Sipunculus nudus snu-mir-2001 precursor miRNA

Sequence

ugcacgucgguauugaggccuguauugugcUUGUGACCGUUAUAAUGGGCAUguggcgauauacaauGCUCUUUGUAACGUUCAUAAGCaugucgcagcaaaugacaucacauugaccu
.....((((((..(((...((((..(((((((((((.((((((((.(((((((((......))).)))))).)))))))).)))))))))))..)))).........))).))))))..

Structure

ugcac      au   ------ggc    au           C        U      -   gc 
     gucggu  uga         cugu  ugugcUUGUGA CGUUAUAA GGGCAU gug  g
     ||||||  |||         ||||  ||||||||||| |||||||| |||||| |||   
     caguua  acu         gacg  guaCGAAUACU GCAAUGUU CUCGua cau  a
---uc      -c   acaguaaac    cu           U        U      a   au 

Annotation confidence Not enough data

Genome context

CM049306.1: 13254413-13254471 []

Clustered miRNAs

2 other miRNAs are < 10 kb from snu-mir-2001

Mature snu-miR-2001-5p

• Accession: MIMAT0063875
• Description: Sipunculus nudus snu-miR-2001-5p mature miRNA
• Sequence: 31 - UUGUGACCGUUAUAAUGGGCAU - 52
• Evidence: not_experimental

Mature snu-miR-2001-3p

• Accession: MIMAT0063876
• Description: Sipunculus nudus snu-miR-2001-3p mature miRNA
• Sequence: 68 - GCUCUUUGUAACGUUCAUAAGC - 89
• Evidence: not_experimental

References