miRBase entry: snu-mir-279b

Stem-loop snu-mir-279b


Accession
MI0042296
Description
Sipunculus nudus snu-mir-279b precursor miRNA


Sequence


gucguugagguuuuuaccgcugggacuaggAUGGCUGUGUGUCUGGUCCAUGuguuucuauaucaUGACUAGAUCCACACUCAUCCcggucagcgggaucacacgugaugaccagc
(((((((.(.......(((((..((((.((((((.((((.((((((((.((((((....))).))))))))))).)))).)))))).))))))))).......).)))))))....

Structure
----       a guuuuua     gg    a      C    U        C   -   u 
    gucguug g       ccgcu  gacu ggAUGG UGUG GUCUGGUC AUG ugu u
    ||||||| |       |||||  |||| |||||| |||| |||||||| ||| |||  
    caguagu c       ggcga  cugg CCUACU ACAC UAGAUCAG Uac aua c
cgac       g acacuag     --    c      C    C        -   u   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM049310.1: 58913018-58913073 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from snu-mir-279b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature snu-miR-279b-5p

Accession MIMAT0063915
Description Sipunculus nudus snu-miR-279b-5p mature miRNA
Sequence 31 - AUGGCUGUGUGUCUGGUCCAUG - 52
Evidence not_experimental

Mature snu-miR-279b-3p

Accession MIMAT0063914
Description Sipunculus nudus snu-miR-279b-3p mature miRNA
Sequence 66 - UGACUAGAUCCACACUCAUCC - 86
Evidence not_experimental

References