miRBase entry: snu-mir-216

Stem-loop snu-mir-216


Accession
MI0042305
Description
Sipunculus nudus snu-mir-216 precursor miRNA


Sequence


guauguguauauacagaagaccugcuucucUAAUAUCAGCUGGUAAUUCAGAGgcugugcugucacuCUGGAUGCUGCCUGAUAUUUUGaggaacagcgugcuuaagucugcuuucacca
....(((......(((((((((((.(((((.((((((((.(((((.(((((((((......))..)))))))))))).))))))))..))))).))).)).))....))))....)))..

Structure
guau   uauaua    ----  -  -   c     -U        C     A       --  ug 
    gug      caga    ag ac cug uucuc  AAUAUCAG UGGUA UUCAGAG  gc  u
    |||      ||||    || || ||| |||||  |||||||| ||||| |||||||  ||   
    cac      gucu    uc ug gac aggaG  UUAUAGUC GUCGU AGGUCuc  ug  g
--ac   --uuuc    gaau  g  c   a     UU        C     -       ac  uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM049308.1: 11132643-11132702 []
Clustered miRNAs
3 other miRNAs are < 10 kb from snu-mir-216
Name Accession Chromosome Start End Strand Confidence




Database links

Mature snu-miR-216-5p

Accession MIMAT0063932
Description Sipunculus nudus snu-miR-216-5p mature miRNA
Sequence 31 - UAAUAUCAGCUGGUAAUUCAGAG - 53
Evidence not_experimental

Mature snu-miR-216-3p

Accession MIMAT0063933
Description Sipunculus nudus snu-miR-216-3p mature miRNA
Sequence 68 - CUGGAUGCUGCCUGAUAUUUUG - 89
Evidence not_experimental

References