miRBase entry: snu-mir-87b

Stem-loop snu-mir-87b


Accession
MI0042324
Description
Sipunculus nudus snu-mir-87b precursor miRNA


Sequence


ugguguucuggaaaaauggguucuguuacaAGCCUGAAAUUUCUGCUCAAACCUgguuuaucaagGUGAGCAAAGUUUCAGGAGUGuaacggggcucucuggcaacaagaagaauc
...(((((((((.....(((((((((((((..((((((((((.(((((..((((.........)))))))))))))))))))..)))))))))))))))))).)))).........

Structure
------ugg    -     aaaau             AG          C     AA    ggu 
         uguu cugga     ggguucuguuaca  CCUGAAAUUU UGCUC  ACCU   u
         |||| |||||     |||||||||||||  |||||||||| |||||  ||||   u
         acaa ggucu     cucggggcaauGU  GGACUUUGAA ACGAG  UGga   a
cuaagaaga    c     -----             GA          -     --    acu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM049318.1: 65885024-65885079 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from snu-mir-87b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature snu-miR-87b-5p

Accession MIMAT0063969
Description Sipunculus nudus snu-miR-87b-5p mature miRNA
Sequence 31 - AGCCUGAAAUUUCUGCUCAAACCU - 54
Evidence not_experimental

Mature snu-miR-87b-3p

Accession MIMAT0063968
Description Sipunculus nudus snu-miR-87b-3p mature miRNA
Sequence 66 - GUGAGCAAAGUUUCAGGAGUG - 86
Evidence not_experimental

References