miRBase entry: npo-mir-1990

Stem-loop npo-mir-1990


Accession
MI0042369
Description
Nautilus pompilius npo-mir-1990 precursor miRNA


Sequence


uucauucuaaugcagacaggaagcacgcgcAGUAAGUUGAUGGGGUCCCAGGuugcaaacaauccCGGGACUACGUCAACUGCUGGcgagugcuuccgccaacuacgucgucgucu
..................((((((((.(((((((.(((((((.((((((.(((((....))).)).)))))).))))))))))).))).)))))))).......(((....)))..

Structure
-uucauucuaaugcagaca        g   -    A       G      A  -   c 
                   ggaagcac cgc AGUA GUUGAUG GGUCCC GG uug a
                   |||||||| ||| |||| ||||||| |||||| || |||  
                   ccuucgug gcG UCGU CAACUGC UCAGGG cc aac a
ucugcugcugcaucaaccg        a   G    -       A      C  u   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JACATO010001038.1: 22720-22775 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from npo-mir-1990
Name Accession Chromosome Start End Strand Confidence




Database links

Mature npo-miR-1990-5p

Accession MIMAT0064057
Description Nautilus pompilius npo-miR-1990-5p mature miRNA
Sequence 31 - AGUAAGUUGAUGGGGUCCCAGG - 52
Evidence not_experimental

Mature npo-miR-1990-3p

Accession MIMAT0064056
Description Nautilus pompilius npo-miR-1990-3p mature miRNA
Sequence 66 - CGGGACUACGUCAACUGCUGG - 86
Evidence not_experimental

References