miRBase entry: npo-mir-317

Stem-loop npo-mir-317


Accession
MI0042376
Description
Nautilus pompilius npo-mir-317 precursor miRNA


Sequence


gugcuugaagauaagauugucaugcgugacAGGGUACCAUGAUGUGUUCCCAgugugaugacgugUGAACACAGCUGGUGGUAUCUGGUcuugugugagcagaacaacaauuucaggac
...(((((((......((((((((((.(((.(((((((((..(((((((.((.(((....))))).)))))))....))))))))).))).))))))).)))........)))))))..

Structure
gug       --auaaga   -       u   A         --GA       C  g   g 
   cuugaag        uug ucaugcg gac GGGUACCAU    UGUGUUC CA ugu a
   |||||||        ||| ||||||| ||| |||||||||    ||||||| || |||  
   ggacuuu        gac agugugu cUG UCUAUGGUG    ACACAAG gu gca u
-ca       aacaacaa   g       u   G         GUCG       U  -   g 


Annotation confidence Not enough data
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Genome context
JACATO010000333.1: 1089799-1089857 []
Clustered miRNAs
1 other miRNA is < 10 kb from npo-mir-317
Name Accession Chromosome Start End Strand Confidence




Database links

Mature npo-miR-317-5p

Accession MIMAT0064071
Description Nautilus pompilius npo-miR-317-5p mature miRNA
Sequence 31 - AGGGUACCAUGAUGUGUUCCCA - 52
Evidence not_experimental

Mature npo-miR-317-3p

Accession MIMAT0064070
Description Nautilus pompilius npo-miR-317-3p mature miRNA
Sequence 66 - UGAACACAGCUGGUGGUAUCUGGU - 89
Evidence not_experimental

References