miRBase entry: npo-mir-2e

Stem-loop npo-mir-2e


Accession
MI0042418
Description
Nautilus pompilius npo-mir-2e precursor miRNA


Sequence


gccacccgccggacuggcugggauauccuuUCAUCAAAGUGACUGUGAUGUGuuucaguuuguuaaccaUAUCACAGCCUGCUUUGAUGAGAggaggcccuuuaccucgaggauggcucuac
((((.(((((.....))).(((...((((((((((((((((.((((((((((.....(((....))))))))))))).).)))))))))))))))..)))..........)).)))).....

Structure
-----    c  gccggacuggcu   aua               - A          uuuca   u 
     gcca cc            ggg   uccuuUCAUCAAAGU G CUGUGAUGUG     guu g
     |||| ||            |||   ||||||||||||||| | ||||||||||     |||  
     cggu gg            ccc   aggAGAGUAGUUUCG C GACACUAUac     caa u
caucu    a  --agcuccauuu   -gg               U C          -----   u 


Annotation confidence Not enough data
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Genome context
JACATO010000013.1: 410469-410530 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from npo-mir-2e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature npo-miR-2e-5p

Accession MIMAT0064154
Description Nautilus pompilius npo-miR-2e-5p mature miRNA
Sequence 31 - UCAUCAAAGUGACUGUGAUGUG - 52
Evidence not_experimental

Mature npo-miR-2e-3p

Accession MIMAT0064155
Description Nautilus pompilius npo-miR-2e-3p mature miRNA
Sequence 70 - UAUCACAGCCUGCUUUGAUGAGA - 92
Evidence not_experimental

References