miRBase entry: npo-mir-2b

Stem-loop npo-mir-2b


Accession
MI0042422
Description
Nautilus pompilius npo-mir-2b precursor miRNA


Sequence


guguugcagagagguuugcugucuacacgGGCGUCAAUGCUGGAUGUAAUAguauuuaguggagaaccuaUCACAGCCAGCUUUGAUGAGCCauguucacuggcaaguucaaccacgaagaa
((((((......((((((((((..(((.((.((((((.(((((.(((.((((..(((.....)))..)))).))).))))).))))))..)).)))..)).))))))))))).)))......

Structure
------   -   cagaga        -  cu   c  -G      U     A   A    ua   a 
      gug uug      gguuugcu gu  aca gG  CGUCAA GCUGG UGU AUAg  uuu g
      ||| |||      |||||||| ||  ||| ||  |||||| ||||| ||| ||||  ||| u
      cac aac      uugaacgg ca  ugu CC  GUAGUU CGACC ACA Uauc  aga g
aagaag   c   ------        u  cu   a  GA      U     G   C    ca   g 


Annotation confidence Not enough data
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Genome context
JACATO010000013.1: 409573-409634 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from npo-mir-2b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature npo-miR-2b-5p

Accession MIMAT0064163
Description Nautilus pompilius npo-miR-2b-5p mature miRNA
Sequence 30 - GGCGUCAAUGCUGGAUGUAAUA - 51
Evidence not_experimental

Mature npo-miR-2b-3p

Accession MIMAT0064162
Description Nautilus pompilius npo-miR-2b-3p mature miRNA
Sequence 71 - UCACAGCCAGCUUUGAUGAGCC - 92
Evidence not_experimental

References