miRBase entry: bge-mir-12541

Stem-loop bge-mir-12541


Accession
MI0042427
Description
Blattella germanica bge-mir-12541 precursor miRNA


Sequence


aaaagaagacaugaagucucuuuuaucuggAAGGGGAAGUGGUGCGUUAGAUuugcuuuaaauuauguCAUAGGCGCUAUUUCCUCUGCCagaaggaagaguucauucuuacuggcugcu
...((((((.(((((..(((((((.(((((.((((((((((((((.(..(((.((........)).)))..).)))))))))))))).))))).)))))))))))))))).)).......

Structure
----aaa  -    c     gu       a     A              G UA   u  cuu 
       ag aaga augaa  cucuuuu ucugg AGGGGAAGUGGUGC U  GAU ug   u
       || |||| |||||  ||||||| ||||| |||||||||||||| |  ||| ||    
       uc uucu uacuu  gagaagg agaCC UCUCCUUUAUCGCG A  Cug au   a
ucgucgg  a    -     --       a     G              G UA   u  uaa 


Annotation confidence Not enough data
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Genome context
KZ615746.1: 116941-117000 []
Clustered miRNAs
1 other miRNA is < 10 kb from bge-mir-12541
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bge-miR-12541-5p

Accession MIMAT0064173
Description Blattella germanica bge-miR-12541-5p mature miRNA
Sequence 31 - AAGGGGAAGUGGUGCGUUAGAU - 52
Evidence not_experimental

Mature bge-miR-12541-3p

Accession MIMAT0064172
Description Blattella germanica bge-miR-12541-3p mature miRNA
Sequence 69 - CAUAGGCGCUAUUUCCUCUGCC - 90
Evidence not_experimental

References