miRBase entry: obi-mir-35

Stem-loop obi-mir-35


Accession
MI0042676
Description
Octopus bimaculoides obi-mir-35 precursor miRNA


Sequence


gauaguaucauuuucuauugguuaucgcuuAGGUGAAGUUCGCCCCGGUCAAUGuauuuuugaaaguccaUCACCGGGUAAACAUUCAUCUAAaagauaaauccaaauuugcuucuguugaua
(((((...((..((....((((((((..((((((((((((.((((.(((..(((.((((....)))).))).))))))).))).)))))))))..)))))..)))))..))...)))))....

Structure
----     uau  uu  cuau   --     gc         -   C    C   CA   u    u 
    gauag   ca  uu    ugg  uuauc  uuAGGUGAA GUU GCCC GGU  AUG auuu u
    |||||   ||  ||    |||  |||||  ||||||||| ||| |||| |||  ||| ||||  
    uuguc   gu  aa    acc  aauag  AAUCUACUU CAA UGGG CCA  Uac ugaa g
auag     uuc  uu  ----   ua     aa         A   A    -   -C   c    a 


Annotation confidence Not enough data
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Genome context
KQ419452: 306979-307041 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from obi-mir-35
Name Accession Chromosome Start End Strand Confidence




Database links

Mature obi-miR-35-5p

Accession MIMAT0064663
Description Octopus bimaculoides obi-miR-35-5p mature miRNA
Sequence 31 - AGGUGAAGUUCGCCCCGGUCAAUG - 54
Evidence not_experimental

Mature obi-miR-35-3p

Accession MIMAT0064662
Description Octopus bimaculoides obi-miR-35-3p mature miRNA
Sequence 71 - UCACCGGGUAAACAUUCAUCUAA - 93
Evidence not_experimental

References