miRBase entry: obi-mir-100

Stem-loop obi-mir-100


Accession
MI0042685
Description
Octopus bimaculoides obi-mir-100 precursor miRNA


Sequence


uuccuuuuguguucguggccugguuacacaAACCCGUAGCUCUGGACUUGUGuugagguugggucaCAAGCUCACGCUUAUGGGUCAGugucgcuaugguaagugaaauuaguagucu
...((.(((..((((..(((((((.((((..(((((((((..(((.((((((............)))))).))).)).)))))))..)))).)))).)))...))))..))).))...

Structure
uuc  u   ug    -ug   -    u    aA       -  UC   A      uugag 
   cu uug  uucg   gcc uggu acac  ACCCGUA GC  UGG CUUGUG     g
   || |||  ||||   ||| |||| ||||  ||||||| ||  ||| ||||||      
   ga gau  aagu   ugg aucg uguG  UGGGUAU CG  ACU GAACac     u
ucu  u   ua    gaa   u    c    AC       U  -C   C      ugggu 


Annotation confidence Not enough data
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Genome context
KQ428790: 41735-41792 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from obi-mir-100
Name Accession Chromosome Start End Strand Confidence




Database links

Mature obi-miR-100-5p

Accession MIMAT0064680
Description Octopus bimaculoides obi-miR-100-5p mature miRNA
Sequence 31 - AACCCGUAGCUCUGGACUUGUG - 52
Evidence not_experimental

Mature obi-miR-100-3p

Accession MIMAT0064681
Description Octopus bimaculoides obi-miR-100-3p mature miRNA
Sequence 67 - CAAGCUCACGCUUAUGGGUCAG - 88
Evidence not_experimental

References