miRBase entry: obi-let-7

Stem-loop obi-let-7


Accession
MI0042698
Description
Octopus bimaculoides obi-let-7 precursor miRNA


Sequence


caacgaggagaaaaguuuaugaccccagacUGAGGUAGUAGGUUGUAUAGUUaagaaauacaccauuucaaggagaaCUGUACAACCUUCUAGCUUUCCcuggggcaugaaugagcaacacuuaaacac
....(((.......(((((((.((((((...(((.(((.(((((((((((((..(((((.....)))))......))))))))))))).))).)))...)))))))))))))........)))......

Structure
--caac   -gagaaaa       a      acU   G   U             ----aa     a 
      gag        guuuaug ccccag   GAG UAG AGGUUGUAUAGUU      gaaau c
      |||        ||||||| ||||||   ||| ||| |||||||||||||      ||||| a
      uuc        uaaguac gggguc   UUC AUC UCCAACAUGUCaa      cuuua c
cacaaa   acaacgag       -      CCU   G   U             gaggaa     c 


Annotation confidence Not enough data
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Genome context
KQ428790: 43097-43165 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from obi-let-7
Name Accession Chromosome Start End Strand Confidence




Database links

Mature obi-let-7-5p

Accession MIMAT0064702
Description Octopus bimaculoides obi-let-7-5p mature miRNA
Sequence 31 - UGAGGUAGUAGGUUGUAUAGUU - 52
Evidence not_experimental

Mature obi-let-7-3p

Accession MIMAT0064703
Description Octopus bimaculoides obi-let-7-3p mature miRNA
Sequence 78 - CUGUACAACCUUCUAGCUUUCC - 99
Evidence not_experimental

References