miRBase entry: esc-mir-1994a

Stem-loop esc-mir-1994a


Accession
MI0042768
Description
Euprymna scolopes esc-mir-1994a precursor miRNA


Sequence


caauaauucaacggauacagccucauaccaAGGGCGGUUACUCUGUUCUGCUUGuuugaacuuuacccucaUGAGACAGUGUGUCCUCCCUUGgaaugggguuuuuugaagcagcagcggcag
..................((((((((.(((((((.((.(((.((((.((.(.((...............)).))))))).))).)).))))))).))))))))...((..((....))..)).

Structure
--caauaauucaacggauac        a       C  U   U    U  G U  uuugaa 
                    agccucau ccaAGGG GG UAC CUGU CU C UG      c
                    |||||||| ||||||| || ||| |||| || | ||      u
                    uuggggua gGUUCCC CC GUG GACA GA G ac      u
gacggcgacgacgaaguuuu        a       U  U   U    -  - U  ucccau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM044488.1: 115526630-115526692 []
Clustered miRNAs
1 other miRNA is < 10 kb from esc-mir-1994a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature esc-miR-1994a-5p

Accession MIMAT0064843
Description Euprymna scolopes esc-miR-1994a-5p mature miRNA
Sequence 31 - AGGGCGGUUACUCUGUUCUGCUUG - 54
Evidence not_experimental

Mature esc-miR-1994a-3p

Accession MIMAT0064842
Description Euprymna scolopes esc-miR-1994a-3p mature miRNA
Sequence 72 - UGAGACAGUGUGUCCUCCCUUG - 93
Evidence not_experimental

References