miRBase entry: esc-mir-35b

Stem-loop esc-mir-35b


Accession
MI0042797
Description
Euprymna scolopes esc-mir-35b precursor miRNA


Sequence


ccuagcuggcagcaaaaggaucuuucguucGAUGAAUUUUAACCCGGCACAUGugguucgauugcaUCACCGGGUAAACAUUCAUCUAacggauuuuccacuuaaacacuucauaugg
....(((...)))....(((...((((((.(((((((.((.((((((...(((((((...)))))))..)))))).)).))))))).))))))...)))...................

Structure
--ccuagcuggcagcaaaa   ucu      c       U  A      CAC       u 
                   gga   uucguu GAUGAAU UU ACCCGG   AUGuggu  
                   |||   |||||| ||||||| || ||||||   ||||||| c
                   ccu   aggcaA CUACUUA AA UGGGCC   Uacguua  
gguauacuucacaaauuca   uuu      U       C  A      -AC       g 


Annotation confidence Not enough data
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Genome context
CM044508.1: 49501410-49501467 []
Clustered miRNAs
1 other miRNA is < 10 kb from esc-mir-35b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature esc-miR-35b-5p

Accession MIMAT0064901
Description Euprymna scolopes esc-miR-35b-5p mature miRNA
Sequence 31 - GAUGAAUUUUAACCCGGCACAUG - 53
Evidence not_experimental

Mature esc-miR-35b-3p

Accession MIMAT0064900
Description Euprymna scolopes esc-miR-35b-3p mature miRNA
Sequence 67 - UCACCGGGUAAACAUUCAUCUA - 88
Evidence not_experimental

References