Accession
MI0042833
Description
Ruditapes philippinarum
rph-mir-12729 precursor miRNA
Sequence
gcaguugaagaaaagauuugacugaccgcucGGGAAUUGGCCAGGUCCGAGAGAuagaauuauaauaacUCGGGACAUUGUCAAUUCCAUGugguuuuucauaacucaucauugaucauca
.((((((((.......))))))))(((((...(((((((((...((((..(((.((.........)).))).))))...)))))))))..)))))..........(((....)))......
.((((((((.......))))))))(((((...(((((((((...((((..(((.((.........)).))).))))...)))))))))..)))))..........(((....)))......
Structure
--gcaguugaagaaaagauuugacug ucG CAG GA A gaa
accgc GGAAUUGGC GUCC GAG ua u
||||| ||||||||| |||| ||| || u
ugguG CCUUAACUG CAGG CUc au a
acuacuaguuacuacucaauacuuuu -UA UUA -G a aau
Annotation confidence
Not enough data
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Genome context
CM018529.1: 4830419-4830479 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from rph-mir-12729
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-12729-5p
| Accession | MIMAT0064971 |
| Description | Ruditapes philippinarum rph-miR-12729-5p mature miRNA |
| Sequence | 32 - GGGAAUUGGCCAGGUCCGAGAGA - 54 |
| Evidence | not_experimental |
Mature rph-miR-12729-3p
| Accession | MIMAT0064970 |
| Description | Ruditapes philippinarum rph-miR-12729-3p mature miRNA |
| Sequence | 70 - UCGGGACAUUGUCAAUUCCAUG - 91 |
| Evidence | not_experimental |
References
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