Stem-loop rph-mir-2001

Accession

MI0042839

Description

Ruditapes philippinarum rph-mir-2001 precursor miRNA

Sequence

uagucuaugauuggcagggcugaugucuuuGUUGUGACCGUUGUAAUGGGUAuauaauauuuacaguaCUCAUUAUAACGUACACAAAUGuugacacagucguuaacaacgagaaaccaug
...(((.((.(((..(.(((((.((((....(((((..(((((((((((((((............)))))))))))))))..))))).....))))))))).)...)))))))).......

Structure

----uag   a  a   -gc g     a    -uuuG     AC               auaau 
       ucu ug uug   a ggcug uguc     UUGUG  CGUUGUAAUGGGUAu     a
       ||| || |||   | ||||| ||||     |||||  |||||||||||||||      
       aga gc aac   u cugac acag     AACAC  GCAAUAUUACUCaug     u
guaccaa   -  -   aau g     -    uuGUA     AU               acauu 

Annotation confidence Not enough data

Genome context

CM018525.1: 43444147-43444207 []

Mature rph-miR-2001-5p

• Accession: MIMAT0064982
• Description: Ruditapes philippinarum rph-miR-2001-5p mature miRNA
• Sequence: 31 - GUUGUGACCGUUGUAAUGGGUA - 52
• Evidence: not_experimental

Mature rph-miR-2001-3p

• Accession: MIMAT0064983
• Description: Ruditapes philippinarum rph-miR-2001-3p mature miRNA
• Sequence: 69 - CUCAUUAUAACGUACACAAAUG - 90
• Evidence: not_experimental

References