Accession
MI0042840
Description
Ruditapes philippinarum
rph-mir-1994b precursor miRNA
Sequence
agcggcagaacagaaauggccucuuuucucAGGGUAGACCUGCUGUUCACAUGguuauuaacuugacaUGAGACAGUGUGUCCUCCCUCAgguuuuuauggccaauuaucuacauucuau
......((((.(((..(((((.....(((.((((..(((.(((((((..((((.(((......))))))).))))))).)))..)))).))).......)))))....)))...))))..
......((((.(((..(((((.....(((.((((..(((.(((((((..((((.(((......))))))).))))))).)))..)))).))).......)))))....)))...))))..
Structure
agcggc --c --aa --ucuuu c UA C CA g uu
agaa aga uggcc ucu AGGG GAC UGCUGUU CAUG uua a
|||| ||| ||||| ||| |||| ||| ||||||| |||| |||
ucuu ucu accgg ggA UCCC CUG GUGACAG GUac agu a
----ua aca auua uauuuuu C UC U -A - uc
Annotation confidence
Not enough data
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Genome context
CM018530.1: 33665598-33665657 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from rph-mir-1994b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-1994b-5p
| Accession | MIMAT0064985 |
| Description | Ruditapes philippinarum rph-miR-1994b-5p mature miRNA |
| Sequence | 31 - AGGGUAGACCUGCUGUUCACAUG - 53 |
| Evidence | not_experimental |
Mature rph-miR-1994b-3p
| Accession | MIMAT0064984 |
| Description | Ruditapes philippinarum rph-miR-1994b-3p mature miRNA |
| Sequence | 69 - UGAGACAGUGUGUCCUCCCUCA - 90 |
| Evidence | not_experimental |
References
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