Accession
MI0042841
Description
Ruditapes philippinarum
rph-mir-1994a precursor miRNA
Sequence
gggaaugauacgcauuuaaggagugaaucaCGGGGCGACACCCUCGUCUCCAUGccauucaaacaagcaUGAGACAGUGUGUCCUCCCAUGaaucgcuuucguuaucaucaucaauacaac
((..((((((((.......(((((((.(((.((((.(((((.((.(((((.((((...........))))))))))).))))).)))).))).))))))))).))))))..))........
((..((((((((.......(((((((.(((.((((.(((((.((.(((((.((((...........))))))))))).))))).)))).))).))))))))).))))))..))........
Structure
-------- ga - cauuuaa a C C C C C cauu
gg augaua cg ggaguga uca GGGG GACAC CU GUCUC AUGc c
|| |||||| || ||||||| ||| |||| ||||| || ||||| |||| a
cu uacuau gc uuucgcu aGU CCCU CUGUG GA CAGAG Uacg a
caacauaa ac u ------- a A C U - - aaca
Annotation confidence
Not enough data
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Genome context
CM018530.1: 33665252-33665312 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from rph-mir-1994a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-1994a-5p
| Accession | MIMAT0064987 |
| Description | Ruditapes philippinarum rph-miR-1994a-5p mature miRNA |
| Sequence | 31 - CGGGGCGACACCCUCGUCUCCAUG - 54 |
| Evidence | not_experimental |
Mature rph-miR-1994a-3p
| Accession | MIMAT0064986 |
| Description | Ruditapes philippinarum rph-miR-1994a-3p mature miRNA |
| Sequence | 70 - UGAGACAGUGUGUCCUCCCAUG - 91 |
| Evidence | not_experimental |
References
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