Stem-loop rph-mir-1993

Accession

MI0042842

Description

Ruditapes philippinarum rph-mir-1993 precursor miRNA

Sequence

aauucgucagcuuggaaaucuagcgagauuUCGUGAAUAAGGGCACGAUGCAgugaaacacgucuugUAUUAUGCUGUUAUUCACGAAAuaucaaaauuaucaacuggaguuaacaagg
..........((((....(((((.((.(((((((((((((.((((.(((((((.((......))))))))).)))).))))))))))))).))...........))))).....)))).

Structure

aauucgucag    -gaaa     ----------c  g             G    C       u  aa 
          cuug     ucuag           ga auuUCGUGAAUAA GGCA GAUGCAg ga  c
          ||||     |||||           || ||||||||||||| |||| ||||||| ||   
          gaac     agguc           cu uAAAGCACUUAUU UCGU UUAUguu cu  a
---------g    aauug     aacuauuaaaa  a             G    A       -  gc 

Annotation confidence Not enough data

Genome context

CM018535.1: 7170414-7170472 []

Mature rph-miR-1993-5p

• Accession: MIMAT0064989
• Description: Ruditapes philippinarum rph-miR-1993-5p mature miRNA
• Sequence: 31 - UCGUGAAUAAGGGCACGAUGCA - 52
• Evidence: not_experimental

Mature rph-miR-1993-3p

• Accession: MIMAT0064988
• Description: Ruditapes philippinarum rph-miR-1993-3p mature miRNA
• Sequence: 68 - UAUUAUGCUGUUAUUCACGAAA - 89
• Evidence: not_experimental

References