Accession
MI0042844
Description
Ruditapes philippinarum
rph-mir-1990 precursor miRNA
Sequence
ggaccaaaucuaagauuuguuaaugugugGAGUAAGUUGAUGGGGUCCCAGGuugcauuuguuccCGGGACUACGUCAACUACUUGCccacgugacaaguaccgaccacgugacuac
..............((((((((.((((.((((((.(((((((.((((((.((..((....)).)).)))))).)))))))))))..)))))))))))))).................
..............((((((((.((((.((((((.(((((((.((((((.((..((....)).)).)))))).)))))))))))..)))))))))))))).................
Structure
---ggaccaaaucuaag a u -- A G A uu a
auuuguua ugug gG AGUA GUUGAUG GGUCCC GG gc u
|||||||| |||| || |||| ||||||| |||||| || ||
ugaacagu gcac cC UCAU CAACUGC UCAGGG cc ug u
caucagugcaccagcca - - GU - A C -u u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018529.1: 4832540-4832596 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from rph-mir-1990
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-1990-5p
| Accession | MIMAT0064993 |
| Description | Ruditapes philippinarum rph-miR-1990-5p mature miRNA |
| Sequence | 30 - GAGUAAGUUGAUGGGGUCCCAGG - 52 |
| Evidence | not_experimental |
Mature rph-miR-1990-3p
| Accession | MIMAT0064992 |
| Description | Ruditapes philippinarum rph-miR-1990-3p mature miRNA |
| Sequence | 66 - CGGGACUACGUCAACUACUUGC - 87 |
| Evidence | not_experimental |
References
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