Accession
MI0042858
Description
Ruditapes philippinarum
rph-mir-317 precursor miRNA
Sequence
agguucuucuagaaauucucuuguaaguguAGGAUACCAUUCUGUGUUUACAuuucuaaucaugUGAACACAGCUGGUGGUAUCUUUUacuucuugagccuagcagcauuguuagcag
.................(((..(.(((((.(((((((((((((((((((((((........))))))))))))..))))))))))).))))))..))).((((((....))))))...
.................(((..(.(((((.(((((((((((((((((((((((........))))))))))))..))))))))))).))))))..))).((((((....))))))...
Structure
---agguucuucuagaaauu uu u u -- uuc
cuc g aagug AGGAUACCAUU CUGUGUUUACAu u
||| | ||||| ||||||||||| ||||||||||||
gag c uucaU UUCUAUGGUGG GACACAAGUgua a
gacgauuguuacgacgaucc uu - U UC cua
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018531.1: 6746836-6746893 []
Clustered miRNAs
2 other miRNAs are < 10 kb from rph-mir-317
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-317-5p
| Accession | MIMAT0065010 |
| Description | Ruditapes philippinarum rph-miR-317-5p mature miRNA |
| Sequence | 31 - AGGAUACCAUUCUGUGUUUACA - 52 |
| Evidence | not_experimental |
Mature rph-miR-317-3p
| Accession | MIMAT0065009 |
| Description | Ruditapes philippinarum rph-miR-317-3p mature miRNA |
| Sequence | 65 - UGAACACAGCUGGUGGUAUCUUUU - 88 |
| Evidence | not_experimental |
References
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