Accession
MI0042861
Description
Ruditapes philippinarum
rph-mir-279 precursor miRNA
Sequence
uacuauuauuagaaaauggaugaauaguugGAUGAGUUUUGGUCUCGUCCAUGuguuguuuuaucaUGACUAGAUCCACACUCAUCCAauauuucgucugcguuucuucauacuuucu
..........(((((.((((((((..(((((((((((...(((((.(((.(((...........)))))).)))))...)))))))))))..))))))))..)))))...........
..........(((((.((((((((..(((((((((((...(((((.(((.(((...........)))))).)))))...)))))))))))..))))))))..)))))...........
Structure
-uacuauuauu -a ua UUU C C uguu
agaaa uggaugaa guugGAUGAGU GGUCU GUC AUG g
||||| |||||||| ||||||||||| ||||| ||| ||| u
ucuuu gucugcuu uaACCUACUCA CUAGA CAG Uac u
ucuuucauacu gc ua CAC U - uauu
Annotation confidence
Not enough data
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Genome context
CM018535.1: 14862667-14862724 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from rph-mir-279
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-279-5p
| Accession | MIMAT0065016 |
| Description | Ruditapes philippinarum rph-miR-279-5p mature miRNA |
| Sequence | 31 - GAUGAGUUUUGGUCUCGUCCAUG - 53 |
| Evidence | not_experimental |
Mature rph-miR-279-3p
| Accession | MIMAT0065015 |
| Description | Ruditapes philippinarum rph-miR-279-3p mature miRNA |
| Sequence | 67 - UGACUAGAUCCACACUCAUCCA - 88 |
| Evidence | not_experimental |
References
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