Stem-loop rph-mir-242

Accession

MI0042864

Description

Ruditapes philippinarum rph-mir-242 precursor miRNA

Sequence

uauuucuacaagaauuccuuaucuacggugAUGCGUAGGCGUUGUGCACAGAuuuuauagucugacUGUGUAUUUCGUCUAAGCACCAcugagaugggacaccagcagacgacauuuu
...............((((.((((.(((((.(((.((((((..((((((((..............))))))))..)))))).))).)))))))))))))...................

Structure

----uauuucuacaagaau    u    a     A   G      UU        Auuuua 
                   uccu aucu cggug UGC UAGGCG  GUGCACAG      u
                   |||| |||| ||||| ||| ||||||  ||||||||       
                   aggg uaga gucAC ACG AUCUGC  UAUGUGUc      a
uuuuacagcagacgaccac    -    -     C   A      UU        agucug 

Annotation confidence Not enough data

Genome context

CM018527.1: 22888371-22888428 []

Mature rph-miR-242-5p

• Accession: MIMAT0065021
• Description: Ruditapes philippinarum rph-miR-242-5p mature miRNA
• Sequence: 31 - AUGCGUAGGCGUUGUGCACAGA - 52
• Evidence: not_experimental

Mature rph-miR-242-3p

• Accession: MIMAT0065022
• Description: Ruditapes philippinarum rph-miR-242-3p mature miRNA
• Sequence: 67 - UGUGUAUUUCGUCUAAGCACCA - 88
• Evidence: not_experimental

References