Accession
MI0042866
Description
Ruditapes philippinarum
rph-mir-216a precursor miRNA
Sequence
aacucgugcaugagaugguuacuguuuguuUAAUCUCAGCUGGUAAUUCUGAGuagacgauuaaagaccuCAAGUUACCAGCGGAGAUCAUAcaaauauaacuacuaacaucuaacaucggc
..((.(((....(((((((((.(((((((...(((((.((((((((((.((((...............)))))))))))))).)))))...)))))))))))......)))))..))).)).
..((.(((....(((((((((.(((((((...(((((.((((((((((.((((...............)))))))))))))).)))))...)))))))))))......)))))..))).)).
Structure
aa c caug ------ c uUA A C uagacg cu gug agaug guua uguuugu AUCUC GCUGGUAAUU UGAG a || ||| ||||| |||| ||||||| ||||| |||||||||| |||| u gg uac ucuac caau auaaacA UAGAG CGACCAUUGA ACuc u -c c --aa aaucau - UAC G - cagaaa
Annotation confidence
Not enough data
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Genome context
CM018538.1: 42665214-42665275 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from rph-mir-216a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-216a-5p
| Accession | MIMAT0065025 |
| Description | Ruditapes philippinarum rph-miR-216a-5p mature miRNA |
| Sequence | 31 - UAAUCUCAGCUGGUAAUUCUGAG - 53 |
| Evidence | not_experimental |
Mature rph-miR-216a-3p
| Accession | MIMAT0065026 |
| Description | Ruditapes philippinarum rph-miR-216a-3p mature miRNA |
| Sequence | 71 - CAAGUUACCAGCGGAGAUCAUA - 92 |
| Evidence | not_experimental |
References
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