Accession
MI0042884
Description
Ruditapes philippinarum
rph-mir-92b-1 precursor miRNA
Sequence
aaugagagcuaaauauagauuugugugggaAGGCCGUGCCUUGUGCAACAUUuguguuucaaaucaAAUUGCACUUGUCCCGGCCUGCuuaugcugucugaagcaacguuuaaaagag
.......(((.....(((((..(((((((.((((((.(.(..((((((.(((((.....)))))....))))))..).).)))))).))))))).))))).)))..............
.......(((.....(((((..(((((((.((((((.(.(..((((((.(((((.....)))))....))))))..).).)))))).))))))).))))).)))..............
Structure
-------aaugaga aaaua uu a U C UU ---C u
gcu uagau guguggg AGGCCG G C GUGCAA AUUug g
||| ||||| ||||||| |||||| | | |||||| ||||| u
cga gucug cguauuC UCCGGC C G CACGUU uaaac u
gagaaaauuugcaa ----a -u G C U UU AAac u
Annotation confidence
Not enough data
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Genome context
CM018539.1: 17477113-17477170 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from rph-mir-92b-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-92b-1-5p
| Accession | MIMAT0065058 |
| Description | Ruditapes philippinarum rph-miR-92b-1-5p mature miRNA |
| Sequence | 31 - AGGCCGUGCCUUGUGCAACAUU - 52 |
| Evidence | not_experimental |
Mature rph-miR-92b-3p
| Accession | MIMAT0065053 |
| Description | Ruditapes philippinarum rph-miR-92b-3p mature miRNA |
| Sequence | 67 - AAUUGCACUUGUCCCGGCCUGC - 88 |
| Evidence | not_experimental |
References
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