Accession
MI0042887
Description
Ruditapes philippinarum
rph-mir-87a precursor miRNA
Sequence
uugguuguuugaauaaagucuaucaaggcuGAGCCUAAGAUUUUGUCUCAAGCCUgagaauaagcagGUGAGCAAAGUUUCAGGUGUCGGcuuuguugacuacagcaacauguccuaaga
...(((((........((((...(((((((((((((.((((((((.(((..(((((........)))))))))))))))).)))).)))))))))..)))))))))..............
...(((((........((((...(((((((((((((.((((((((.(((..(((((........)))))))))))))))).)))).)))))))))..)))))))))..............
Structure
-----------uug uugaauaa uau - A U AA aga
guugu aguc caaggcuGA GCCU AGAUUUUG CUC GCCUg a
||||| |||| ||||||||| |||| |||||||| ||| |||||
cgaca ucag guuucGGCU UGGA UUUGAAAC GAG UGgac u
agaauccuguacaa -------- -uu G C - -- gaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018532.1: 24178272-24178331 []
Clustered miRNAs
2 other miRNAs are < 10 kb from rph-mir-87a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-87a-5p
| Accession | MIMAT0065064 |
| Description | Ruditapes philippinarum rph-miR-87a-5p mature miRNA |
| Sequence | 31 - GAGCCUAAGAUUUUGUCUCAAGCCU - 55 |
| Evidence | not_experimental |
Mature rph-miR-87a-3p
| Accession | MIMAT0065063 |
| Description | Ruditapes philippinarum rph-miR-87a-3p mature miRNA |
| Sequence | 68 - GUGAGCAAAGUUUCAGGUGUCGG - 90 |
| Evidence | not_experimental |
References
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