Accession
MI0042888
Description
Ruditapes philippinarum
rph-mir-87b precursor miRNA
Sequence
ggcacauuuggcuggaagucaugagugugGUGUGCCUGUUAUUUUGUCUCAAGCCUguguaauuucuagGUGAGCAAAGUUUCAGGUGUCAcacuugugaugauuuacaucuggagaugaa
..((..(((((.((...(((((((((((((...(((((..((((((.(((..(((((.(......)))))))))))))))..))))).)))))))))))))......)).)))))..))..
..((..(((((.((...(((((((((((((...(((((..((((((.(((..(((((.(......)))))))))))))))..))))).)))))))))))))......)).)))))..))..
Structure
gg ca c ---gaa UGU UU U AA u ua ca uuugg ug gucaugagugugG GCCUG AUUUUG CUC GCCUg g a || ||||| || ||||||||||||| ||||| |||||| ||| ||||| | gu agguc ac uaguguucacACU UGGAC UGAAAC GAG UGgau c u aa ag u auuuag --G UU - -- - uu
Annotation confidence
Not enough data
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Genome context
CM018532.1: 24178980-24179040 []
Clustered miRNAs
2 other miRNAs are < 10 kb from rph-mir-87b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-87b-5p
| Accession | MIMAT0065066 |
| Description | Ruditapes philippinarum rph-miR-87b-5p mature miRNA |
| Sequence | 30 - GUGUGCCUGUUAUUUUGUCUCAAGCCU - 56 |
| Evidence | not_experimental |
Mature rph-miR-87b-3p
| Accession | MIMAT0065065 |
| Description | Ruditapes philippinarum rph-miR-87b-3p mature miRNA |
| Sequence | 70 - GUGAGCAAAGUUUCAGGUGUCA - 91 |
| Evidence | not_experimental |
References
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