Accession
MI0042890
Description
Ruditapes philippinarum
rph-mir-71 precursor miRNA
Sequence
gauguuuauuaaagauccuuauuuaugcugUGAAAGACAUGGGUAGUGAGAUGuuuguaguuuaucaCCUUGCUAACCUGUCUUUUGCAguguuguagggccagcuucuauuuguauag
...........(((..((((((..(((((((((((((((.((.(((((((.((............)).))))))).))))))))))))))))).))))))....)))............
...........(((..((((((..(((((((((((((((.((.(((((((.((............)).))))))).))))))))))))))))).))))))....)))............
Structure
-gauguuuauua --au uu U G A uuugu
aag ccuuau augcugUGAAAGACA GG UAGUGAG UG a
||| |||||| ||||||||||||||| || ||||||| ||
uuc gggaug ugugACGUUUUCUGU CC AUCGUUC ac g
gauauguuuauc gacc -u - A C uauuu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018536.1: 47739342-47739400 []
Clustered miRNAs
5 other miRNAs are < 10 kb from rph-mir-71
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-71-5p
| Accession | MIMAT0065069 |
| Description | Ruditapes philippinarum rph-miR-71-5p mature miRNA |
| Sequence | 31 - UGAAAGACAUGGGUAGUGAGAUG - 53 |
| Evidence | not_experimental |
Mature rph-miR-71-3p
| Accession | MIMAT0065070 |
| Description | Ruditapes philippinarum rph-miR-71-3p mature miRNA |
| Sequence | 68 - CCUUGCUAACCUGUCUUUUGCA - 89 |
| Evidence | not_experimental |
References
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