Accession
MI0042895
Description
Ruditapes philippinarum
rph-mir-33-1 precursor miRNA
Sequence
ggaagaaugaagagauggcauugcuugguugUGCAUUGUAGUUGCAUUGCAuguauguuacucugugCAAUGUUCCUGCAGUGCAAUAacuagguguccuuuagcagcaauggucgac
.......(((((.(((......(((((((((((((((((((..((((((((((((...)))...)))))))))..))))))))).))))))))))))))))))...............
.......(((((.(((......(((((((((((((((((((..((((((((((((...)))...)))))))))..))))))))).))))))))))))))))))...............
Structure
--------ggaagaa a ggcauu - UU --- u
ugaag gau gcuugguugU GCAUUGUAG GCAUUGCAu gua
||||| ||| |||||||||| ||||||||| ||||||||| ||| g
auuuc cug uggaucaAUA CGUGACGUC UGUAACgug cau
cagcugguaacgacg - ------ A CU ucu u
Annotation confidence
Not enough data
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Genome context
CM018523.1: 7580295-7580352 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from rph-mir-33-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-33-5p
| Accession | MIMAT0065078 |
| Description | Ruditapes philippinarum rph-miR-33-5p mature miRNA |
| Sequence | 32 - UGCAUUGUAGUUGCAUUGCA - 51 |
| Evidence | not_experimental |
Mature rph-miR-33-3p
| Accession | MIMAT0065077 |
| Description | Ruditapes philippinarum rph-miR-33-3p mature miRNA |
| Sequence | 68 - CAAUGUUCCUGCAGUGCAAUA - 88 |
| Evidence | not_experimental |
References
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