Accession
MI0042898
Description
Ruditapes philippinarum
rph-mir-29a precursor miRNA
Sequence
agagauaauacagagaauaacugucaagagCACUGACUUCUUGUGGUGGGUAGAgucacuccauuguucauuuucUAGCACCAUUUGAAAUCAGUGCCucuugaugguguauugcaauauuuuuauaa
(((((((...(((......(((((((((((((((((.(((..((((((..(((((..((......)).....))))).))))))..))).)))))).)))))))))))...)))...)))))))....
(((((((...(((......(((((((((((((((((.(((..((((((..(((((..((......)).....))))).))))))..))).)))))).)))))))))))...)))...)))))))....
Structure
---- aua agaaua - C UU GG ---uc uc
agagaua cag acugucaagag CACUGA UUC GUGGUG UAGAg ac c
||||||| ||| ||||||||||| |||||| ||| |||||| ||||| ||
uuuuuau guu ugguaguucuC GUGACU AAG UACCAC AUcuu ug a
aaua aac ---aug C A UU -G uuacu uu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018527.1: 5207953-5208020 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from rph-mir-29a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-29a-5p
| Accession | MIMAT0065084 |
| Description | Ruditapes philippinarum rph-miR-29a-5p mature miRNA |
| Sequence | 31 - CACUGACUUCUUGUGGUGGGUAGA - 54 |
| Evidence | not_experimental |
Mature rph-miR-29a-3p
| Accession | MIMAT0065083 |
| Description | Ruditapes philippinarum rph-miR-29a-3p mature miRNA |
| Sequence | 76 - UAGCACCAUUUGAAAUCAGUGCC - 98 |
| Evidence | not_experimental |
References
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