Stem-loop rph-mir-745b

Accession

MI0042899

Description

Ruditapes philippinarum rph-mir-745b precursor miRNA

Sequence

augaugguuguaaagaagagugguauuaccAGUUCUUCCUUUGUGCAGAUGUCUCaugcuucaguauagaGAGCUGCCAAAUGAAGGGCUGUuaaaaucacugcaaaacuacaaugggauug
....(.((((((......((((((.(((.(((((((((.((((.((((...((((((((....)))).)))).)))))))).))))))))).))).)))))).......)))))).).....

Structure

-auga g      -aagaag      a   c         C    U    AUG    -    u 
     u guugua       aguggu uua cAGUUCUUC UUUG GCAG   UCUC augc u
     | ||||||       |||||| ||| ||||||||| |||| ||||   |||| ||||  
     g uaacau       ucacua aau GUCGGGAAG AAAC CGUC   AGag uaug c
guuag g      caaaacg      a   U         U    -    --G    a    a 

Annotation confidence Not enough data

Genome context

CM018526.1: 21806394-21806455 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from rph-mir-745b

Mature rph-miR-745b-5p

• Accession: MIMAT0065086
• Description: Ruditapes philippinarum rph-miR-745b-5p mature miRNA
• Sequence: 31 - AGUUCUUCCUUUGUGCAGAUGUCUC - 55
• Evidence: not_experimental

Mature rph-miR-745b-3p

• Accession: MIMAT0065085
• Description: Ruditapes philippinarum rph-miR-745b-3p mature miRNA
• Sequence: 71 - GAGCUGCCAAAUGAAGGGCUGU - 92
• Evidence: not_experimental

References