Accession
MI0042901
Description
Ruditapes philippinarum
rph-mir-12 precursor miRNA
Sequence
aacuggaaauagugauugaaagauaggcuaUGAGUAUUACAUCAGGUACUGAcuguauguuuguucCGUACCUUAUGUGAUGUUCUUAcuuugucuugucugaaacaaacacauuggg
...........(((.(((..((((((((((.(((((((((((.((((((.(((.........)))..)))))).))))))))))).))....).)))))))....))).)))......
...........(((.(((..((((((((((.(((((((((((.((((((.(((.........)))..)))))).))))))))))).))....).)))))))....))).)))......
Structure
aacuggaaaua a --aa - ---- U C -U ugu
gug uug agauagg c ua GAGUAUUACAU AGGUAC GAc a
||| ||| ||||||| | || ||||||||||| |||||| ||| u
cac aac ucuguuc g AU CUUGUAGUGUA UCCAUG uug g
-----ggguua a aaag u uuuc U U Cc uuu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018538.1: 42667417-42667474 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from rph-mir-12
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-12-5p
| Accession | MIMAT0065089 |
| Description | Ruditapes philippinarum rph-miR-12-5p mature miRNA |
| Sequence | 31 - UGAGUAUUACAUCAGGUACUGA - 52 |
| Evidence | not_experimental |
Mature rph-miR-12-3p
| Accession | MIMAT0065090 |
| Description | Ruditapes philippinarum rph-miR-12-3p mature miRNA |
| Sequence | 67 - CGUACCUUAUGUGAUGUUCUUA - 88 |
| Evidence | not_experimental |
References
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