Accession
MI0042905
Description
Ruditapes philippinarum
rph-mir-100 precursor miRNA
Sequence
gagcaaugucuaaauguaaucuguuguauaAACCCGUAGAUCCGAACUUGUGguuuguaugauauauucgCAAGCUCGUACCUACUGGUCUGuauugcaggugacaacauaugauaacuguu
.((((.((((....(((.((((((.(((((.(((.((((...(((.(((((((..((((...)))).))))))).)))...)))).))).))))).)))))).)))......))))..))))
.((((.((((....(((.((((((.(((((.(((.((((...(((.(((((((..((((...)))).))))))).)))...)))).))).))))).)))))).)))......))))..))))
Structure
g -a --uaaa a u A C AUC A uu u agca uguc ugu aucugu guaua ACC GUAG CGA CUUGUGg ugua |||| |||| ||| |||||| ||||| ||| |||| ||| ||||||| |||| g uugu auag aca uggacg uauGU UGG CAUC GCU GAACgcu auau - ca uauaca g u C U CAU C -u a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018531.1: 24992246-24992307 []
Clustered miRNAs
1 other miRNA is < 10 kb from rph-mir-100
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-100-5p
| Accession | MIMAT0065097 |
| Description | Ruditapes philippinarum rph-miR-100-5p mature miRNA |
| Sequence | 31 - AACCCGUAGAUCCGAACUUGUG - 52 |
| Evidence | not_experimental |
Mature rph-miR-100-3p
| Accession | MIMAT0065098 |
| Description | Ruditapes philippinarum rph-miR-100-3p mature miRNA |
| Sequence | 71 - CAAGCUCGUACCUACUGGUCUG - 92 |
| Evidence | not_experimental |
References
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