Stem-loop rph-mir-9

Accession

MI0042907

Description

Ruditapes philippinarum rph-mir-9 precursor miRNA

Sequence

uggggcaugcuguagaagacucugguucugUCUUUGGUUAUCUAGCUGUAUGAuugacauuuaccgcucAUAAAGCUAGGUUACCAAAGGCAgaaauagaugucagaacuaccuacaacaaa
.......((.(((((..(((((((.(((((((((((((.((((((((.(((((.((........)).))))).)))))))).))))))))))))).)))).)))........))))).))..

Structure

uggggca  c     ------aa   -    g             U        G     u  aca 
       ug uguag        gac ucug uucugUCUUUGGU AUCUAGCU UAUGA ug   u
       || |||||        ||| |||| ||||||||||||| |||||||| ||||| ||    
       ac acauc        cug agau aagACGGAAACCA UGGAUCGA AUAcu gc   u
-----aa  a     caucaaga   u    a             U        A     c  cau 

Annotation confidence Not enough data

Genome context

CM018526.1: 11142109-11142170 [+]

Mature rph-miR-9-5p

• Accession: MIMAT0065101
• Description: Ruditapes philippinarum rph-miR-9-5p mature miRNA
• Sequence: 31 - UCUUUGGUUAUCUAGCUGUAUGA - 53
• Evidence: not_experimental

Mature rph-miR-9-3p

• Accession: MIMAT0065102
• Description: Ruditapes philippinarum rph-miR-9-3p mature miRNA
• Sequence: 70 - AUAAAGCUAGGUUACCAAAGGCA - 92
• Evidence: not_experimental

References