Accession
MI0042910
Description
Ruditapes philippinarum
rph-mir-2a precursor miRNA
Sequence
aacugaggaaaagaaagaaaaguccugcuaCUGGCCAAGUGGUUGUUAUAUAuugauuucccuaUAUCACAGCCUGCUUGGAUCAGUAguaugaucguauuuuacaccaaucacagua
.((((..((........(((((((.(((((((((((((((((((((.(((((..(....)..))))).)))))).)))))).))))))))).)))....)))).......)).)))).
.((((..((........(((((((.(((((((((((((((((((((.(((((..(....)..))))).)))))).)))))).))))))))).)))....)))).......)).)))).
Structure
a ag aaagaaag ---- c - - U uu a acug ga aaaa guc ugcuaCUGG CCAAGU GGUUGU AUAUA g u |||| || |||| ||| ||||||||| |||||| |||||| ||||| | ugac cu uuuu uag augAUGACU GGUUCG CCGACA UAUau c u a -a -aaccaca augc u A U C cc u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018536.1: 47739104-47739161 []
Clustered miRNAs
5 other miRNAs are < 10 kb from rph-mir-2a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-2a-5p
| Accession | MIMAT0065108 |
| Description | Ruditapes philippinarum rph-miR-2a-5p mature miRNA |
| Sequence | 31 - CUGGCCAAGUGGUUGUUAUAUA - 52 |
| Evidence | not_experimental |
Mature rph-miR-2a-3p
| Accession | MIMAT0065107 |
| Description | Ruditapes philippinarum rph-miR-2a-3p mature miRNA |
| Sequence | 65 - UAUCACAGCCUGCUUGGAUCAGUA - 88 |
| Evidence | not_experimental |
References
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