Stem-loop rph-mir-2h

Accession

MI0042912

Description

Ruditapes philippinarum rph-mir-2h precursor miRNA

Sequence

cucaagaaguggaauuggucuuuauuuaggCCAUCAAAGUGGUUGUUGAUGUGuugcauuuaccaUAUCACAGCCUGCUUUGAUGAGCUuaguauaggcaguaaacaagcagcaccugg
........(((...(((((((.((((.(((((((((((((((((((.((((((..........)))))))))))).))))))))).)))))))).))))......)))....)))....

Structure

cucaagaa   -gaa   ------    u    u    -         -      U      uugc 
        gug    uug      gucu uauu aggC CAUCAAAGU GGUUGU GAUGUG    a
        |||    |||      |||| |||| |||| ||||||||| |||||| ||||||     
        cac    aac      cgga auga uUCG GUAGUUUCG CCGACA CUAUac    u
----gguc   gacg   aaauga    u    -    A         U      -      cauu 

Annotation confidence Not enough data

Genome context

QUSP01001813.1: 155017-155075 []

Clustered miRNAs

1 other miRNA is < 10 kb from rph-mir-2h

Mature rph-miR-2h-5p

• Accession: MIMAT0065112
• Description: Ruditapes philippinarum rph-miR-2h-5p mature miRNA
• Sequence: 31 - CCAUCAAAGUGGUUGUUGAUGUG - 53
• Evidence: not_experimental

Mature rph-miR-2h-3p

• Accession: MIMAT0065111
• Description: Ruditapes philippinarum rph-miR-2h-3p mature miRNA
• Sequence: 66 - UAUCACAGCCUGCUUUGAUGAGCU - 89
• Evidence: not_experimental

References