Stem-loop rph-mir-2i

Accession

MI0042913

Description

Ruditapes philippinarum rph-mir-2i precursor miRNA

Sequence

gaacuggcaaaaggaacuuuccucuaaaagCCAUCAAAGAGGCUGUGAACUGcuauuuuguugacaGAUCACAGUCUGCUUUGGUGAGUuuuagaaugaauaugcugcaagaagccaaa
....((((....(((....)))(((((((..(((((((((((((((((.(((.((......)).))).))))))))).))))))))..)))))))..................))))..

Structure

gaac    ----aaaaggaacuuucc       gC        -         A   c  uu 
    uggc                  ucuaaaa  CAUCAAAG AGGCUGUGA CUG ua  u
    ||||                  |||||||  |||||||| ||||||||| ||| ||   
    accg                  agauuuU  GUGGUUUC UCUGACACU Gac gu  u
--aa    aagaacgucguauaagua       GA        G         A   a  ug 

Annotation confidence Not enough data

Genome context

QUSP01002410.1: 60139-60197 []

Clustered miRNAs

4 other miRNAs are < 10 kb from rph-mir-2i

Mature rph-miR-2i-5p

• Accession: MIMAT0065114
• Description: Ruditapes philippinarum rph-miR-2i-5p mature miRNA
• Sequence: 31 - CCAUCAAAGAGGCUGUGAACUG - 52
• Evidence: not_experimental

Mature rph-miR-2i-3p

• Accession: MIMAT0065113
• Description: Ruditapes philippinarum rph-miR-2i-3p mature miRNA
• Sequence: 67 - GAUCACAGUCUGCUUUGGUGAGU - 89
• Evidence: not_experimental

References