Accession
MI0042915
Description
Ruditapes philippinarum
rph-mir-2f precursor miRNA
Sequence
aaucauuuauuauauguugacaaucgaagCCAUCAAGAAGGUUUGUGAACUGaugugauauugcaGAUCACAGCCUGCUUUGGUGAGCuucuguuggcaauucacaagauuucauuaa
...............((((.((((.((((((((((((.(((((.((((.(((..((...))..))).)))))))))..))))))).))))).)))).)))).................
...............((((.((((.((((((((((((.(((((.((((.(((..((...))..))).)))))))))..))))))).))))).)))).)))).................
Structure
--aaucauuuauuauau a c - -A U A au g
guug caau gaagC CAUCAAG AGGUU GUGA CUG gu
|||| |||| ||||| ||||||| ||||| |||| ||| || a
uaac guug cuuCG GUGGUUU UCCGA CACU Gac ua
aauuacuuuagaacacu g u A CG - A gu u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
QUSP01002410.1: 63485-63542 []
Clustered miRNAs
4 other miRNAs are < 10 kb from rph-mir-2f
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-2f-5p
| Accession | MIMAT0065118 |
| Description | Ruditapes philippinarum rph-miR-2f-5p mature miRNA |
| Sequence | 30 - CCAUCAAGAAGGUUUGUGAACUG - 52 |
| Evidence | not_experimental |
Mature rph-miR-2f-3p
| Accession | MIMAT0065117 |
| Description | Ruditapes philippinarum rph-miR-2f-3p mature miRNA |
| Sequence | 66 - GAUCACAGCCUGCUUUGGUGAGC - 88 |
| Evidence | not_experimental |
References
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