Stem-loop rph-mir-2e

Accession

MI0042916

Description

Ruditapes philippinarum rph-mir-2e precursor miRNA

Sequence

aaauauuuguuaagacaauaggauaggugcAAAUCAAAGUGACUGUGAAUUGuuguuuauucucaAAUCACAGUCUGCUUUGGUGAGCaucugccuguaacuauucuuaaaagugucc
..((((((.((((((..(((((.(((((((..((((((((((((((((.(((...........))).)))))))).))))))))..))))))))))))......))))))))))))..

Structure

aa      g      ----ca     a       AA        -        A   uugu 
  auauuu uuaaga      auagg uaggugc  AUCAAAGU GACUGUGA UUG    u
  |||||| ||||||      ||||| |||||||  |||||||| |||||||| |||    u
  ugugaa aauucu      ugucc gucuaCG  UGGUUUCG CUGACACU Aac    a
cc      -      uaucaa     -       AG        U        A   ucuu 

Annotation confidence Not enough data

Genome context

QUSP01002410.1: 64540-64597 []

Clustered miRNAs

4 other miRNAs are < 10 kb from rph-mir-2e

Mature rph-miR-2e-5p

• Accession: MIMAT0065120
• Description: Ruditapes philippinarum rph-miR-2e-5p mature miRNA
• Sequence: 31 - AAAUCAAAGUGACUGUGAAUUG - 52
• Evidence: not_experimental

Mature rph-miR-2e-3p

• Accession: MIMAT0065119
• Description: Ruditapes philippinarum rph-miR-2e-3p mature miRNA
• Sequence: 66 - AAUCACAGUCUGCUUUGGUGAGC - 88
• Evidence: not_experimental

References