Accession
MI0042918
Description
Ruditapes philippinarum
rph-mir-2c precursor miRNA
Sequence
ugcaguggacagaaauugggauaaguguugGCGUCAAAGUGUCUGUGAAAUGuaaauuaggucaUAUCACAGCCAGCUUUGAUGACAgcaauauucucagauccuucaugacaaccu
((..(((((..((..((((((....(((((.(((((((((..((((((.(((..........))).))))))...))))))))).)))))....)))))).)).)))))..))....
((..(((((..((..((((((....(((((.(((((((((..((((((.(((..........))).))))))...))))))))).)))))....)))))).)).)))))..))....
Structure
---- ca ca aa uaag G -GU A uaaa
ug gugga ga uuggga uguug CGUCAAAGU CUGUGA AUG u
|| ||||| || |||||| ||||| ||||||||| |||||| |||
ac uacuu cu gacucu acgAC GUAGUUUCG GACACU Uac u
ucca ag -c -a uaua A ACC A ugga
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018536.1: 47737950-47738006 []
Clustered miRNAs
5 other miRNAs are < 10 kb from rph-mir-2c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-2c-5p
| Accession | MIMAT0065124 |
| Description | Ruditapes philippinarum rph-miR-2c-5p mature miRNA |
| Sequence | 31 - GCGUCAAAGUGUCUGUGAAAUG - 52 |
| Evidence | not_experimental |
Mature rph-miR-2c-3p
| Accession | MIMAT0065123 |
| Description | Ruditapes philippinarum rph-miR-2c-3p mature miRNA |
| Sequence | 65 - UAUCACAGCCAGCUUUGAUGACA - 87 |
| Evidence | not_experimental |
References
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