Accession
MI0042920
Description
Ruditapes philippinarum
rph-mir-2b-2 precursor miRNA
Sequence
cacuguacaggagaaaaaauggacacugggCUCGCAGAGUGGCUGUGAAAUGcugaugauauauacccaUAUCACAGCCAGCUUUGAUGAGCCcagaaccauuuacaugcaucuauuuugauc
................((((((...(((((((((((((((((((((((.(((...(((...)))...))).))))))))).))))).)))))))))..))))))......(((......))).
................((((((...(((((((((((((((((((((((.(((...(((...)))...))).))))))))).))))).)))))))))..))))))......(((......))).
Structure
---cacuguacaggagaaa aca - - A cug a
aaaugg cugggCUCG CAGAG UGGCUGUGA AUG aug
|||||| ||||||||| ||||| ||||||||| ||| ||| u
uuuacc gacCCGAGU GUUUC ACCGACACU Uac uau
cuaguuuuaucuacguaca -aa A G A cca a
Annotation confidence
Not enough data
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Genome context
CM018536.1: 47738531-47738593 []
Clustered miRNAs
5 other miRNAs are < 10 kb from rph-mir-2b-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-2b-2-5p
| Accession | MIMAT0065128 |
| Description | Ruditapes philippinarum rph-miR-2b-2-5p mature miRNA |
| Sequence | 31 - CUCGCAGAGUGGCUGUGAAAUG - 52 |
| Evidence | not_experimental |
Mature rph-miR-2b-2-3p
| Accession | MIMAT0065127 |
| Description | Ruditapes philippinarum rph-miR-2b-2-3p mature miRNA |
| Sequence | 70 - UAUCACAGCCAGCUUUGAUGAGCC - 93 |
| Evidence | not_experimental |
References
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