Accession
MI0042921
Description
Ruditapes philippinarum
rph-mir-2b-1 precursor miRNA
Sequence
auaacgccaguugaauuugauuguuaaagCCAUCAAAAUGACUGUGAUAUGuuguaaacaauuccUAUCACAGCCAGCUUUGAUGAGCuuucauaaucuguaacaugcaguccuuugu
.....((..((((.....((((((.((((((((((((.((.((((((((.((((....))))...)))))))).))..))))))).))))).))))))..))))..))..........
.....((..((((.....((((((.((((((((((((.((.((((((((.((((....))))...)))))))).))..))))))).))))).))))))..))))..))..........
Structure
-----auaac ca aauuu u - -A A --U u
gc guug gauugu aaagC CAUCAAA UG CUGUGAUA Guug a
|| |||| |||||| ||||| ||||||| || |||||||| ||||
cg caau cuaaua uuuCG GUAGUUU AC GACACUAU uaac a
uguuuccuga ua ---gu c A CG C ccu a
Annotation confidence
Not enough data
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Genome context
CM018536.1: 47738775-47738832 []
Clustered miRNAs
5 other miRNAs are < 10 kb from rph-mir-2b-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-miR-2b-1-5p
| Accession | MIMAT0065129 |
| Description | Ruditapes philippinarum rph-miR-2b-1-5p mature miRNA |
| Sequence | 30 - CCAUCAAAAUGACUGUGAUAUG - 51 |
| Evidence | not_experimental |
Mature rph-miR-2b-3p
| Accession | MIMAT0065125 |
| Description | Ruditapes philippinarum rph-miR-2b-3p mature miRNA |
| Sequence | 66 - UAUCACAGCCAGCUUUGAUGAGC - 88 |
| Evidence | not_experimental |
References
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