Accession
MI0042923
Description
Ruditapes philippinarum
rph-let-7 precursor miRNA
Sequence
agaaucuugacagaaagcauggauacuagaUGAGGUAGUAGGUUGUAUAGUUagaacuacaccauacaggagaaCUAUUCAACCUUCUAGCUUUCCuagugacaugauaaucuacaccauacagga
....(((((..(((...((((..((((((..(((.(((.((((((.((((((....((.........))...)))))).)))))).))).)))..)))))).))))....)))........)))))
....(((((..(((...((((..((((((..(((.(((.((((((.((((((....((.........))...)))))).)))))).))).)))..)))))).))))....)))........)))))
Structure
agaa ------ac -aag ga aU G U U agaa aca
ucuug aga caug uacuag GAG UAG AGGUUG AUAGUU cu c
||||| ||| |||| |||||| ||| ||| |||||| |||||| || c
aggac ucu guac gugauC UUC AUC UCCAAC UAUCaa ga a
---- auaccaca aaua -a CU G U U -gag cau
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM018531.1: 24991230-24991295 []
Clustered miRNAs
1 other miRNA is < 10 kb from rph-let-7
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rph-let-7-5p
| Accession | MIMAT0065132 |
| Description | Ruditapes philippinarum rph-let-7-5p mature miRNA |
| Sequence | 31 - UGAGGUAGUAGGUUGUAUAGUU - 52 |
| Evidence | not_experimental |
Mature rph-let-7-3p
| Accession | MIMAT0065133 |
| Description | Ruditapes philippinarum rph-let-7-3p mature miRNA |
| Sequence | 75 - CUAUUCAACCUUCUAGCUUUCC - 96 |
| Evidence | not_experimental |
References
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