miRBase entry: bko-mir-12787-2

Stem-loop bko-mir-12787-2


Accession
MI0043029
Description
Brachionus koreanus bko-mir-12787-2 precursor miRNA


Sequence


aacagucaauuaauaggcgcguauauuaguGUCAAGUGAUGACCCUGGUUAUGaagucaacucaUCACCGGGUCUACACUUGCCACuaauuucgccuucaauaaacaucaagucaa
..............(((((.....(((((((.((((((..(((((.(((.((((.......)))).))))))))..)))))).)))))))..)))))...................

Structure
-----aacagucaauuaau     cguau       U      AU     U   U    ag 
                   aggcg     auuaguG CAAGUG  GACCC GGU AUGa  u
                   |||||     ||||||| ||||||  ||||| ||| ||||  c
                   uccgc     uaauCAC GUUCAC  CUGGG CCA Uacu  a
aacugaacuacaaauaacu     ---uu       C      AU     -   C    ca 


Annotation confidence Not enough data
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Genome context
PJRA01000493.1: 855453-855508 []
Clustered miRNAs
1 other miRNA is < 10 kb from bko-mir-12787-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bko-miR-12787-2-5p

Accession MIMAT0065334
Description Brachionus koreanus bko-miR-12787-2-5p mature miRNA
Sequence 31 - GUCAAGUGAUGACCCUGGUUAUG - 53
Evidence not_experimental

Mature bko-miR-12787-3p

Accession MIMAT0065333
Description Brachionus koreanus bko-miR-12787-3p mature miRNA
Sequence 65 - UCACCGGGUCUACACUUGCCAC - 86
Evidence not_experimental

References