Stem-loop bko-mir-31-1

Accession

MI0043032

Description

Brachionus koreanus bko-mir-31-1 precursor miRNA

Sequence

gacugaacugaaaauuaaauuugagcuauuAGGCAAGAUGCUGGCAUAGCUAAUaguaaaauuuuuUAGUUAUGCUUCAUCUCGGCCCAAuugcucuaaugagcaacuucgauaaagaau
........((((......(((.((((.(((.(((.(((((..(((((((((((.((......)).))))))))))).)))))..))).))).)))).))).......)))).........

Structure

-gacugaac    -aauuaa   u    u   A   -A     CU           U  ua 
         ugaa       auu gagc auu GGC  AGAUG  GGCAUAGCUAA ag  a
         ||||       ||| |||| ||| |||  |||||  ||||||||||| ||   
         gcuu       uaa cucg uAA CCG  UCUAC  UCGUAUUGAUu uu  a
uaagaaaua    caacgag   u    u   C   GC     -U           u  ua 

Annotation confidence Not enough data

Genome context

PJRA01000011.1: 798985-799044 []

Mature bko-miR-31-5p

• Accession: MIMAT0065336
• Description: Brachionus koreanus bko-miR-31-5p mature miRNA
• Sequence: 31 - AGGCAAGAUGCUGGCAUAGCUAAU - 54
• Evidence: not_experimental

Mature bko-miR-31-1-3p

• Accession: MIMAT0065338
• Description: Brachionus koreanus bko-miR-31-1-3p mature miRNA
• Sequence: 67 - UAGUUAUGCUUCAUCUCGGCCCAA - 90
• Evidence: not_experimental

References